Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934981.1_cds_XP_016480950.1_72335
CDS Infomation

[gene=LOC107802027] [db_xref=GeneID:107802027] [protein=ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic-like isoform X2] [protein_id=XP_016480950.1] [location=complement(join(62431..62720,62819..63291,63409..63494,63590..63695,63846..64174,64785..64829))] [gbkey=CDS]
Sequence

ATGGCTACCTCTGTCTCAACCATTGGAGCTGTCAACAAAGCACCGTTGAGTTTGAACAAC
TCAGTTGCTGGAACTTCAGTTCCAAGCACAGCCTTCTTTGGCAAAACTTTGAAGAAAGTG
TATGGAAAAGGTGTTTCAAACCCCAAAGTTACAAACAAGAGCTTGAGGATTGTAGCTGAA
GAAAAAGATGCAGATCCCAAGAAACAGACCGACAGTGACAGATGGAAGGGTCTTGTTGCT
GACTTTTCGGACGATCAACAGGACATCACCCGGGGTAAGGGTATGGTTGACAGTCTTTTC
CAGGCTCCAACCGGTACTGGTACTCACCACGCTGTGTTGCAATCCTACGAATACGTCAGC
CAAGGTCTTCGTCAGTACAACTTGGACAACAAGTTGGATGGATTCTACATCGCTCCTGCT
TTCATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCTTGAAATTGCCCAACATCAAG
GTTCCACTTATCTTGGGTATCTGGGGAGGCAAAGGTCAAGGTAAATCATTCCAGTGTGAA
CTTGTCTTCAGAAAGATGGGAATCAACCCCATTATGATGAGTGCTGGAGAATTGGAGAGT
GGAAATGCAGGAGAGCCAGCCAAATTGATTAGGCAAAGGTACAGAGAGGCAGCAGAAATC
ATCAGAAAGGGTAACATGTGTTGCCTCTTCATCAACGATCTCGATGCAGGAGCTGGTAGA
ATGGGTGGAACTACTCAATACACTGTCAACAACCAAATGGTGAATGCCACTCTCATGAAC
ATTGCTGACAACCCGACAAATGTTCAGCTCCCCGGTATGTACAACAAGCAAGAGAATGCC
AGGGTCCCTATTATCGTCACTGGTAACGATTTCTCCACATTGTATGCTCCACTTATCCGT
GATGGTCGTATGGAGAAGTTCTACTGGGCACCAACTAGGGAGGATAGAATTGGTGTTTGC
ACAGGTATTTTCAGGACTGACAATGTTCCTGCTGAGGACGTTGTCAAGATTGTCGATAAC
TTCCCTGGACAATCTATCGACTTTTTCGGTGCACTGAGGGCGAGAGTATATGATGATGAA
GTGAGGAAGTGGATTTCAGGCGCTGGAATTGAAAAGATTGGAGACAAACTTTTGAACTCT
TTTGACGGACCACCAACTTTTGAGCAACCAAAGATGACCATTGAGAAGCTCCTCGAGTAC
GGTAACATGCTTGTACAAGAGCAAGAGAATGTTAAGAGAGTTCAGTTGGCTGACAAGTAC
CTCAAAGAGGCTGCACTTGGTGATGCCAATGCTGATGCCATTAACAATGGATCCTTCTTT
GCTAGTTAG

Peptide Sequence

PEP ID

XP_016480950.1
PEP Infomation

PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MATSVSTIGAVNKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSNPKVTNKSLRIVAE
EKDADPKKQTDSDRWKGLVADFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVS
QGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCE
LVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGR
MGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIR
DGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDE
VRKWISGAGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKY
LKEAALGDANADAINNGSFFAS

Transcript Sequence

Gene sequence data has not been registered.